Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Frem1Q684R7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.58□□□□□ -0.4
Frem1Q684R7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Gm14042-201ENSMUST00000120139 833 ntBASIC12.58□□□□□ -0.4
Frem1Q684R7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Mir7085-201ENSMUST00000184353 66 ntBASIC12.58□□□□□ -0.4
Frem1Q684R7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.58□□□□□ -0.4
Frem1Q684R7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Frem1Q684R7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm44719-201ENSMUST00000206404 149 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm18062-201ENSMUST00000208020 547 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm18055-201ENSMUST00000208254 547 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.57□□□□□ -0.4
Frem1Q684R7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm20445-201ENSMUST00000061905 565 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Carlr-201ENSMUST00000181515 2574 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm12138-201ENSMUST00000122180 951 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Frem1Q684R7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Frem1Q684R7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Frem1Q684R7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Frem1Q684R7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.56□□□□□ -0.4
Frem1Q684R7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Gm23984-201ENSMUST00000157139 203 ntBASIC12.56□□□□□ -0.4
Frem1Q684R7 Gm45453-201ENSMUST00000211758 853 ntBASIC12.56□□□□□ -0.4
Frem1Q684R7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.56□□□□□ -0.4
Frem1Q684R7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Frem1Q684R7 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms