Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.12□□□□□ -0.47
SspnQ62147 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SspnQ62147 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.12□□□□□ -0.47
SspnQ62147 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.12□□□□□ -0.47
SspnQ62147 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.12□□□□□ -0.47
SspnQ62147 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SspnQ62147 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SspnQ62147 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.11□□□□□ -0.47
SspnQ62147 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SspnQ62147 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.11□□□□□ -0.47
SspnQ62147 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.11□□□□□ -0.47
SspnQ62147 Mzt1-203ENSMUST00000227948 952 ntBASIC12.11□□□□□ -0.47
SspnQ62147 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Gm7461-201ENSMUST00000058918 827 ntBASIC12.11□□□□□ -0.47
SspnQ62147 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SspnQ62147 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
SspnQ62147 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
SspnQ62147 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SspnQ62147 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
SspnQ62147 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
SspnQ62147 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Gm12350-201ENSMUST00000121208 462 ntBASIC12.1□□□□□ -0.47
SspnQ62147 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.1□□□□□ -0.47
SspnQ62147 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.1□□□□□ -0.47
SspnQ62147 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.1□□□□□ -0.47
SspnQ62147 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.1□□□□□ -0.47
SspnQ62147 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SspnQ62147 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
SspnQ62147 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SspnQ62147 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms