Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a4Q60857 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Gm27437-201ENSMUST00000183429 107 ntBASIC14.78□□□□□ -0.04
Slc6a4Q60857 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.78□□□□□ -0.04
Slc6a4Q60857 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a4Q60857 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Slc6a4Q60857 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.77□□□□□ -0.05
Slc6a4Q60857 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Gm14042-201ENSMUST00000120139 833 ntBASIC14.77□□□□□ -0.05
Slc6a4Q60857 Gm14719-201ENSMUST00000121891 340 ntBASIC14.77□□□□□ -0.05
Slc6a4Q60857 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.77□□□□□ -0.05
Slc6a4Q60857 AA619741-201ENSMUST00000195095 646 ntBASIC14.77□□□□□ -0.05
Slc6a4Q60857 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.77□□□□□ -0.05
Slc6a4Q60857 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Gm2423-201ENSMUST00000074863 733 ntBASIC14.77□□□□□ -0.05
Slc6a4Q60857 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Slc6a4Q60857 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc6a4Q60857 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Gm4875-201ENSMUST00000118257 786 ntBASIC14.76□□□□□ -0.05
Slc6a4Q60857 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc6a4Q60857 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms