Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm8749-201ENSMUST00000117737 331 ntBASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm14042-201ENSMUST00000120139 833 ntBASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms