Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Gm12485-201ENSMUST00000119641 291 ntBASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Gm11803-201ENSMUST00000119966 444 ntBASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mdc1Q5PSV9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mdc1Q5PSV9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mdc1Q5PSV9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mdc1Q5PSV9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms