Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 AC162801.1-201ENSMUST00000220612 198 ntBASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Gm24526-201ENSMUST00000082921 158 ntBASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Gm3695-201ENSMUST00000087222 1009 ntBASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
Trim41Q5NCC3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Gm44799-201ENSMUST00000207639 1202 ntBASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Mettl6-204ENSMUST00000227595 1027 ntBASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC24.96■■□□□ 1.59
Trim41Q5NCC3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Gm45667-201ENSMUST00000210380 1316 ntBASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Gm33320-201ENSMUST00000192232 530 ntBASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 AC155286.1-201ENSMUST00000218632 448 ntBASIC24.95■■□□□ 1.58
Trim41Q5NCC3 AC154687.2-201ENSMUST00000223853 640 ntBASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trim41Q5NCC3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Gm27572-201ENSMUST00000183702 255 ntBASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Gm9728-201ENSMUST00000200197 1055 ntBASIC24.94■■□□□ 1.58
Trim41Q5NCC3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 AC132317.1-201ENSMUST00000227227 962 ntBASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Gm9797-201ENSMUST00000052902 613 ntBASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim41Q5NCC3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Gm15460-201ENSMUST00000118147 391 ntBASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Snora78-201ENSMUST00000158630 128 ntBASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Gm29199-201ENSMUST00000187766 775 ntBASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Gm4857-201ENSMUST00000192718 785 ntBASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Gm10766-202ENSMUST00000194123 606 ntBASIC24.93■■□□□ 1.58
Trim41Q5NCC3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Trim41Q5NCC3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim41Q5NCC3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim41Q5NCC3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trim41Q5NCC3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trim41Q5NCC3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim41Q5NCC3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim41Q5NCC3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms