Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.03□□□□□ -0.48
Znf48Q3US17 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.03□□□□□ -0.48
Znf48Q3US17 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.03□□□□□ -0.48
Znf48Q3US17 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Znf48Q3US17 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.03□□□□□ -0.48
Znf48Q3US17 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Znf48Q3US17 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Znf48Q3US17 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Znf48Q3US17 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Znf48Q3US17 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Znf48Q3US17 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Znf48Q3US17 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Znf48Q3US17 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Rprl2-201ENSMUST00000157150 290 ntBASIC12.02□□□□□ -0.49
Znf48Q3US17 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm18889-201ENSMUST00000174284 929 ntBASIC12.02□□□□□ -0.49
Znf48Q3US17 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Mir6977-201ENSMUST00000184960 64 ntBASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm5244-202ENSMUST00000189517 743 ntBASIC12.02□□□□□ -0.49
Znf48Q3US17 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.02□□□□□ -0.49
Znf48Q3US17 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.02□□□□□ -0.49
Znf48Q3US17 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Znf48Q3US17 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Znf48Q3US17 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Znf48Q3US17 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.01□□□□□ -0.49
Znf48Q3US17 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Znf48Q3US17 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.01□□□□□ -0.49
Znf48Q3US17 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Znf48Q3US17 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms