Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Cks1brtQ3UNC9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cks1brtQ3UNC9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cks1brtQ3UNC9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cks1brtQ3UNC9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Cks1brtQ3UNC9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Cks1brtQ3UNC9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cks1brtQ3UNC9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Gm12933-201ENSMUST00000120203 872 ntBASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cks1brtQ3UNC9 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms