Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Gm3961-201ENSMUST00000204425 994 ntBASIC16.93■□□□□ 0.3
Col5a2Q3U962 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Gm44397-201ENSMUST00000195950 113 ntBASIC16.93■□□□□ 0.3
Col5a2Q3U962 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Gm18056-201ENSMUST00000207670 568 ntBASIC16.92■□□□□ 0.3
Col5a2Q3U962 Gm18061-201ENSMUST00000208350 562 ntBASIC16.92■□□□□ 0.3
Col5a2Q3U962 Gm18063-201ENSMUST00000208529 568 ntBASIC16.92■□□□□ 0.3
Col5a2Q3U962 Gm18052-201ENSMUST00000208750 559 ntBASIC16.92■□□□□ 0.3
Col5a2Q3U962 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a2Q3U962 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Gm13385-201ENSMUST00000121089 220 ntBASIC16.91■□□□□ 0.3
Col5a2Q3U962 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a2Q3U962 Gm27331-201ENSMUST00000183705 60 ntBASIC16.91■□□□□ 0.3
Col5a2Q3U962 Gm27243-201ENSMUST00000183964 521 ntBASIC16.91■□□□□ 0.3
Col5a2Q3U962 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.91■□□□□ 0.3
Col5a2Q3U962 Gm7783-201ENSMUST00000204795 781 ntBASIC16.91■□□□□ 0.3
Col5a2Q3U962 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.91■□□□□ 0.3
Col5a2Q3U962 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.91■□□□□ 0.3
Col5a2Q3U962 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.9■□□□□ 0.3
Col5a2Q3U962 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms