Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.25■□□□□ 0.03
Col19a1Q0VF58 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Gm29705-201ENSMUST00000212598 474 ntBASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.25■□□□□ 0.03
Col19a1Q0VF58 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Gm1335-201ENSMUST00000121653 386 ntBASIC15.24■□□□□ 0.03
Col19a1Q0VF58 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Gm45865-201ENSMUST00000211815 945 ntBASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Gm18935-201ENSMUST00000212692 664 ntBASIC15.24■□□□□ 0.03
Col19a1Q0VF58 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col19a1Q0VF58 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col19a1Q0VF58 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms