Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Gm15358-201ENSMUST00000119249 520 ntBASIC12.82□□□□□ -0.36
Rab42Q0PD08 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.82□□□□□ -0.36
Rab42Q0PD08 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.82□□□□□ -0.36
Rab42Q0PD08 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rab42Q0PD08 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.81□□□□□ -0.36
Rab42Q0PD08 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.81□□□□□ -0.36
Rab42Q0PD08 Birc2-201ENSMUST00000054878 378 ntBASIC12.81□□□□□ -0.36
Rab42Q0PD08 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rab42Q0PD08 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Pck2-205ENSMUST00000226352 2784 ntBASIC12.8□□□□□ -0.36
Rab42Q0PD08 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab42Q0PD08 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms