Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm27741-201ENSMUST00000185060 237 ntBASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Gm18489-201ENSMUST00000172565 551 ntBASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Gm9682-201ENSMUST00000197505 556 ntBASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Gm7461-201ENSMUST00000058918 827 ntBASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ptchd3Q0EEE2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Mir5131-201ENSMUST00000175426 93 ntBASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ptchd3Q0EEE2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ptchd3Q0EEE2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ptchd3Q0EEE2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ptchd3Q0EEE2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ptchd3Q0EEE2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.96□□□□□ -0.18
Ptchd3Q0EEE2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ptchd3Q0EEE2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms