Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm14701-201ENSMUST00000117156 348 ntBASIC12.04□□□□□ -0.48
Tff1Q08423 Gm12008-201ENSMUST00000117791 755 ntBASIC12.04□□□□□ -0.48
Tff1Q08423 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Tff1Q08423 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.04□□□□□ -0.48
Tff1Q08423 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Gm45167-201ENSMUST00000208007 322 ntBASIC12.04□□□□□ -0.48
Tff1Q08423 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.04□□□□□ -0.48
Tff1Q08423 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Acot6-202ENSMUST00000222921 3622 ntBASIC12.04□□□□□ -0.48
Tff1Q08423 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tff1Q08423 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tff1Q08423 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tff1Q08423 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tff1Q08423 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tff1Q08423 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.03□□□□□ -0.48
Tff1Q08423 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Tff1Q08423 Chchd1-203ENSMUST00000224633 557 ntBASIC12.03□□□□□ -0.48
Tff1Q08423 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tff1Q08423 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tff1Q08423 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.03□□□□□ -0.48
Tff1Q08423 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.03□□□□□ -0.48
Tff1Q08423 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.03□□□□□ -0.48
Tff1Q08423 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tff1Q08423 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tff1Q08423 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tff1Q08423 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tff1Q08423 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.02□□□□□ -0.48
Tff1Q08423 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tff1Q08423 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tff1Q08423 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tff1Q08423 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.02□□□□□ -0.48
Tff1Q08423 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tff1Q08423 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tff1Q08423 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tff1Q08423 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.02□□□□□ -0.49
Tff1Q08423 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Gm11025-201ENSMUST00000140773 466 ntBASIC12.02□□□□□ -0.49
Tff1Q08423 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 Gm17271-201ENSMUST00000165535 355 ntBASIC12.02□□□□□ -0.49
Tff1Q08423 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Tff1Q08423 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.02□□□□□ -0.49
Tff1Q08423 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.02□□□□□ -0.49
Tff1Q08423 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tff1Q08423 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tff1Q08423 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tff1Q08423 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tff1Q08423 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tff1Q08423 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms