Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.22□□□□□ -0.13
Sox4Q06831 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox4Q06831 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sox4Q06831 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox4Q06831 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox4Q06831 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox4Q06831 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox4Q06831 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.21□□□□□ -0.13
Sox4Q06831 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox4Q06831 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox4Q06831 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox4Q06831 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox4Q06831 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox4Q06831 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox4Q06831 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox4Q06831 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sox4Q06831 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sox4Q06831 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox4Q06831 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Sox4Q06831 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox4Q06831 Gm38294-201ENSMUST00000192831 381 ntBASIC14.2□□□□□ -0.14
Sox4Q06831 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox4Q06831 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox4Q06831 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox4Q06831 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox4Q06831 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.2□□□□□ -0.14
Sox4Q06831 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox4Q06831 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Sox4Q06831 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Sox4Q06831 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.19□□□□□ -0.14
Sox4Q06831 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Sox4Q06831 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox4Q06831 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sox4Q06831 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox4Q06831 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms