Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.43□□□□□ -0.74
Hspg2Q05793 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.43□□□□□ -0.74
Hspg2Q05793 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hspg2Q05793 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.43□□□□□ -0.74
Hspg2Q05793 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hspg2Q05793 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Gm16177-201ENSMUST00000120728 718 ntBASIC10.43□□□□□ -0.74
Hspg2Q05793 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.43□□□□□ -0.74
Hspg2Q05793 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.43□□□□□ -0.74
Hspg2Q05793 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hspg2Q05793 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hspg2Q05793 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm8227-201ENSMUST00000223306 571 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm6983-201ENSMUST00000214912 628 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.42□□□□□ -0.74
Hspg2Q05793 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm7029-201ENSMUST00000173226 450 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.42□□□□□ -0.74
Hspg2Q05793 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hspg2Q05793 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hspg2Q05793 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm22334-201ENSMUST00000158070 133 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm24514-201ENSMUST00000174961 285 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.41□□□□□ -0.74
Hspg2Q05793 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm43138-201ENSMUST00000199123 708 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm5161-201ENSMUST00000075243 853 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms