Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Gm43094-201ENSMUST00000196549 921 ntBASIC18.05■□□□□ 0.48
Nkx2-3P97334 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.05■□□□□ 0.48
Nkx2-3P97334 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.04■□□□□ 0.48
Nkx2-3P97334 Gm11425-201ENSMUST00000119608 498 ntBASIC18.04■□□□□ 0.48
Nkx2-3P97334 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Gm9002-201ENSMUST00000178437 499 ntBASIC18.04■□□□□ 0.48
Nkx2-3P97334 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Gm9396-201ENSMUST00000076703 567 ntBASIC18.04■□□□□ 0.48
Nkx2-3P97334 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.04■□□□□ 0.48
Nkx2-3P97334 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx2-3P97334 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Gm4804-201ENSMUST00000182234 999 ntBASIC18.03■□□□□ 0.48
Nkx2-3P97334 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Gm18307-201ENSMUST00000206864 949 ntBASIC18.03■□□□□ 0.48
Nkx2-3P97334 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Nkx2-3P97334 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.03■□□□□ 0.48
Nkx2-3P97334 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.03■□□□□ 0.48
Nkx2-3P97334 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-3P97334 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.02■□□□□ 0.48
Nkx2-3P97334 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.02■□□□□ 0.48
Nkx2-3P97334 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Gm44608-201ENSMUST00000206827 855 ntBASIC18.02■□□□□ 0.48
Nkx2-3P97334 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-3P97334 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.02■□□□□ 0.47
Nkx2-3P97334 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Nkx2-3P97334 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Nkx2-3P97334 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nkx2-3P97334 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-3P97334 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-3P97334 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-3P97334 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-3P97334 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms