Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.53□□□□□ -0.24
Six5P70178 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.53□□□□□ -0.24
Six5P70178 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.53□□□□□ -0.24
Six5P70178 Gm10275-202ENSMUST00000168697 495 ntBASIC13.53□□□□□ -0.24
Six5P70178 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.53□□□□□ -0.24
Six5P70178 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Six5P70178 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Mir6990-201ENSMUST00000183724 91 ntBASIC13.53□□□□□ -0.24
Six5P70178 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Six5P70178 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.53□□□□□ -0.24
Six5P70178 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.53□□□□□ -0.24
Six5P70178 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Gm10275-201ENSMUST00000092620 635 ntBASIC13.53□□□□□ -0.24
Six5P70178 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six5P70178 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.52□□□□□ -0.24
Six5P70178 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six5P70178 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six5P70178 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six5P70178 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six5P70178 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Six5P70178 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Six5P70178 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Gm13365-201ENSMUST00000121188 973 ntBASIC13.52□□□□□ -0.25
Six5P70178 Gm14822-201ENSMUST00000122247 291 ntBASIC13.52□□□□□ -0.25
Six5P70178 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.52□□□□□ -0.25
Six5P70178 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.52□□□□□ -0.25
Six5P70178 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.52□□□□□ -0.25
Six5P70178 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Six5P70178 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Six5P70178 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.52□□□□□ -0.25
Six5P70178 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Six5P70178 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Six5P70178 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Six5P70178 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Six5P70178 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Six5P70178 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Six5P70178 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Six5P70178 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Six5P70178 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Gm6736-201ENSMUST00000166583 948 ntBASIC13.51□□□□□ -0.25
Six5P70178 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.51□□□□□ -0.25
Six5P70178 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.51□□□□□ -0.25
Six5P70178 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.51□□□□□ -0.25
Six5P70178 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Six5P70178 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.51□□□□□ -0.25
Six5P70178 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six5P70178 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six5P70178 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six5P70178 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six5P70178 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.5□□□□□ -0.25
Six5P70178 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six5P70178 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six5P70178 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms