Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.32□□□□□ -0.12
Crnkl1P63154 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.31□□□□□ -0.12
Crnkl1P63154 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.31□□□□□ -0.12
Crnkl1P63154 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.31□□□□□ -0.12
Crnkl1P63154 Mir8098-201ENSMUST00000184011 137 ntBASIC14.31□□□□□ -0.12
Crnkl1P63154 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.31□□□□□ -0.12
Crnkl1P63154 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.31□□□□□ -0.12
Crnkl1P63154 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Crnkl1P63154 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crnkl1P63154 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.3□□□□□ -0.12
Crnkl1P63154 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.3□□□□□ -0.12
Crnkl1P63154 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Crnkl1P63154 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crnkl1P63154 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.29□□□□□ -0.12
Crnkl1P63154 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Crnkl1P63154 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Gm12497-201ENSMUST00000138778 237 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms