Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.32□□□□□ -0.76
Rpl39P62892 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.31□□□□□ -0.76
Rpl39P62892 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rpl39P62892 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Rpl39P62892 Gm23634-201ENSMUST00000175071 91 ntBASIC10.31□□□□□ -0.76
Rpl39P62892 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.31□□□□□ -0.76
Rpl39P62892 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Gm6296-201ENSMUST00000222599 943 ntBASIC10.31□□□□□ -0.76
Rpl39P62892 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Rpl39P62892 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rpl39P62892 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rpl39P62892 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.31□□□□□ -0.76
Rpl39P62892 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
Rpl39P62892 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rpl39P62892 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rpl39P62892 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rpl39P62892 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Rpl39P62892 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.3□□□□□ -0.76
Rpl39P62892 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.3□□□□□ -0.76
Rpl39P62892 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.3□□□□□ -0.76
Rpl39P62892 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.3□□□□□ -0.76
Rpl39P62892 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.29□□□□□ -0.76
Rpl39P62892 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.29□□□□□ -0.76
Rpl39P62892 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.29□□□□□ -0.76
Rpl39P62892 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms