Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.21□□□□□ -0.3
Cdh11P55288 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.21□□□□□ -0.3
Cdh11P55288 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh11P55288 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdh11P55288 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.2□□□□□ -0.3
Cdh11P55288 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.2□□□□□ -0.3
Cdh11P55288 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdh11P55288 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Cdh11P55288 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdh11P55288 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdh11P55288 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdh11P55288 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdh11P55288 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdh11P55288 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cdh11P55288 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdh11P55288 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdh11P55288 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh11P55288 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdh11P55288 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdh11P55288 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdh11P55288 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh11P55288 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh11P55288 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cdh11P55288 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdh11P55288 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.19□□□□□ -0.3
Cdh11P55288 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdh11P55288 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.19□□□□□ -0.3
Cdh11P55288 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Gm10175-201ENSMUST00000086013 645 ntBASIC13.19□□□□□ -0.3
Cdh11P55288 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.19□□□□□ -0.3
Cdh11P55288 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cdh11P55288 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh11P55288 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh11P55288 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh11P55288 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh11P55288 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Cdh11P55288 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdh11P55288 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.18□□□□□ -0.3
Cdh11P55288 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.18□□□□□ -0.3
Cdh11P55288 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdh11P55288 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.18□□□□□ -0.3
Cdh11P55288 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.18□□□□□ -0.3
Cdh11P55288 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh11P55288 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms