Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nub1P54729 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Nub1P54729 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Nub1P54729 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.56■□□□□ 0.08
Nub1P54729 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.56■□□□□ 0.08
Nub1P54729 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.56■□□□□ 0.08
Nub1P54729 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Nub1P54729 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.56■□□□□ 0.08
Nub1P54729 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nub1P54729 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nub1P54729 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Nub1P54729 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nub1P54729 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.55■□□□□ 0.08
Nub1P54729 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nub1P54729 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.55■□□□□ 0.08
Nub1P54729 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.55■□□□□ 0.08
Nub1P54729 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Gm43125-201ENSMUST00000201724 730 ntBASIC15.55■□□□□ 0.08
Nub1P54729 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.55■□□□□ 0.08
Nub1P54729 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nub1P54729 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nub1P54729 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nub1P54729 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nub1P54729 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.54■□□□□ 0.08
Nub1P54729 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.54■□□□□ 0.08
Nub1P54729 Gm18737-201ENSMUST00000173594 937 ntBASIC15.54■□□□□ 0.08
Nub1P54729 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.54■□□□□ 0.08
Nub1P54729 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.54■□□□□ 0.08
Nub1P54729 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.54■□□□□ 0.08
Nub1P54729 Gm43474-201ENSMUST00000196415 774 ntBASIC15.54■□□□□ 0.08
Nub1P54729 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Nub1P54729 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nub1P54729 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.54■□□□□ 0.08
Nub1P54729 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nub1P54729 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nub1P54729 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.54■□□□□ 0.08
Nub1P54729 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.53■□□□□ 0.08
Nub1P54729 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.53■□□□□ 0.08
Nub1P54729 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nub1P54729 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Nub1P54729 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nub1P54729 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Nub1P54729 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.53■□□□□ 0.08
Nub1P54729 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.53■□□□□ 0.08
Nub1P54729 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms