Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-1P50220 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12□□□□□ -0.49
Nkx2-1P50220 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Gm4081-201ENSMUST00000195287 1838 ntBASIC12□□□□□ -0.49
Nkx2-1P50220 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Matn2-206ENSMUST00000228570 2798 ntBASIC11.99□□□□□ -0.49
Nkx2-1P50220 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Gm27867-201ENSMUST00000184778 125 ntBASIC11.99□□□□□ -0.49
Nkx2-1P50220 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-1P50220 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-1P50220 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.97□□□□□ -0.49
Nkx2-1P50220 Gm12644-201ENSMUST00000119935 606 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms