Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24496-201ENSMUST00000178287 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm25649-201ENSMUST00000178476 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm25548-201ENSMUST00000178681 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm23147-201ENSMUST00000178841 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm26095-201ENSMUST00000179270 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm22171-201ENSMUST00000179283 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm23936-201ENSMUST00000179354 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm22619-201ENSMUST00000179516 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm25255-201ENSMUST00000179579 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24755-201ENSMUST00000179691 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm26506-201ENSMUST00000179692 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm25086-201ENSMUST00000179931 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm23243-201ENSMUST00000180047 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24659-201ENSMUST00000180212 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24169-201ENSMUST00000180244 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm23689-201ENSMUST00000180354 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm27359-201ENSMUST00000184153 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm27785-201ENSMUST00000184268 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm27466-201ENSMUST00000184396 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm27703-201ENSMUST00000184836 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.17■□□□□ 0.34
Ercc3P49135 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.17■□□□□ 0.34
Ercc3P49135 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.17■□□□□ 0.34
Ercc3P49135 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ercc3P49135 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ercc3P49135 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.16■□□□□ 0.34
Ercc3P49135 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ercc3P49135 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.16■□□□□ 0.34
Ercc3P49135 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.16■□□□□ 0.34
Ercc3P49135 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.16■□□□□ 0.34
Ercc3P49135 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ercc3P49135 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ercc3P49135 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ercc3P49135 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.16■□□□□ 0.34
Ercc3P49135 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.16■□□□□ 0.34
Ercc3P49135 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ercc3P49135 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.15■□□□□ 0.34
Ercc3P49135 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Ercc3P49135 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ercc3P49135 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ercc3P49135 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Gm24158-201ENSMUST00000175263 71 ntBASIC17.15■□□□□ 0.34
Ercc3P49135 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.15■□□□□ 0.34
Ercc3P49135 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.15■□□□□ 0.34
Ercc3P49135 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.15■□□□□ 0.34
Ercc3P49135 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.15■□□□□ 0.34
Ercc3P49135 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.15■□□□□ 0.34
Ercc3P49135 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.15■□□□□ 0.34
Ercc3P49135 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.15■□□□□ 0.34
Ercc3P49135 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ercc3P49135 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ercc3P49135 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ercc3P49135 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ercc3P49135 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.14■□□□□ 0.33
Ercc3P49135 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ercc3P49135 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.14■□□□□ 0.33
Ercc3P49135 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms