Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
GdnfP48540 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
GdnfP48540 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.68□□□□□ -0.38
GdnfP48540 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GdnfP48540 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.67□□□□□ -0.38
GdnfP48540 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
GdnfP48540 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.67□□□□□ -0.38
GdnfP48540 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.67□□□□□ -0.38
GdnfP48540 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.67□□□□□ -0.38
GdnfP48540 Gm9682-201ENSMUST00000197505 556 ntBASIC12.67□□□□□ -0.38
GdnfP48540 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.67□□□□□ -0.38
GdnfP48540 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Gm18195-201ENSMUST00000207604 706 ntBASIC12.67□□□□□ -0.38
GdnfP48540 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
GdnfP48540 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
GdnfP48540 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.67□□□□□ -0.38
GdnfP48540 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
GdnfP48540 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GdnfP48540 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.66□□□□□ -0.38
GdnfP48540 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.66□□□□□ -0.38
GdnfP48540 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
GdnfP48540 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Gm13036-201ENSMUST00000117799 748 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.66□□□□□ -0.38
GdnfP48540 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Gm10499-201ENSMUST00000174094 934 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Mir5126-201ENSMUST00000175513 77 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
GdnfP48540 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Gm2651-201ENSMUST00000203560 838 ntBASIC12.66□□□□□ -0.38
GdnfP48540 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.66□□□□□ -0.38
GdnfP48540 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
GdnfP48540 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms