Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gli1P47806 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.13□□□□□ -0.15
Gli1P47806 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli1P47806 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli1P47806 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.12□□□□□ -0.15
Gli1P47806 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.12□□□□□ -0.15
Gli1P47806 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gli1P47806 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.12□□□□□ -0.15
Gli1P47806 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.12□□□□□ -0.15
Gli1P47806 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.12□□□□□ -0.15
Gli1P47806 Gm44872-201ENSMUST00000207864 420 ntBASIC14.12□□□□□ -0.15
Gli1P47806 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.12□□□□□ -0.15
Gli1P47806 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gli1P47806 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gli1P47806 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.11□□□□□ -0.15
Gli1P47806 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.11□□□□□ -0.15
Gli1P47806 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.11□□□□□ -0.15
Gli1P47806 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.11□□□□□ -0.15
Gli1P47806 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gli1P47806 Gm27300-201ENSMUST00000184085 97 ntBASIC14.11□□□□□ -0.15
Gli1P47806 Gm27335-201ENSMUST00000184758 97 ntBASIC14.11□□□□□ -0.15
Gli1P47806 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.11□□□□□ -0.15
Gli1P47806 Gm37153-201ENSMUST00000193637 231 ntBASIC14.11□□□□□ -0.15
Gli1P47806 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.11□□□□□ -0.15
Gli1P47806 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gli1P47806 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Gli1P47806 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gli1P47806 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli1P47806 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.11□□□□□ -0.15
Gli1P47806 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli1P47806 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli1P47806 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.1□□□□□ -0.15
Gli1P47806 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli1P47806 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli1P47806 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli1P47806 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms