Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.17■□□□□ 0.02
Gdf6P43028 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.17■□□□□ 0.02
Gdf6P43028 Gm9522-201ENSMUST00000182394 926 ntBASIC15.17■□□□□ 0.02
Gdf6P43028 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.17■□□□□ 0.02
Gdf6P43028 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.17■□□□□ 0.02
Gdf6P43028 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.17■□□□□ 0.02
Gdf6P43028 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gdf6P43028 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gdf6P43028 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gdf6P43028 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gdf6P43028 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gdf6P43028 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.16■□□□□ 0.02
Gdf6P43028 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.16■□□□□ 0.02
Gdf6P43028 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.16■□□□□ 0.02
Gdf6P43028 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gdf6P43028 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gdf6P43028 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Gdf6P43028 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Gdf6P43028 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Gdf6P43028 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gdf6P43028 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gdf6P43028 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gdf6P43028 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gdf6P43028 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gdf6P43028 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gdf6P43028 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Gm12882-201ENSMUST00000121696 517 ntBASIC15.15■□□□□ 0.02
Gdf6P43028 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.15■□□□□ 0.02
Gdf6P43028 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.15■□□□□ 0.02
Gdf6P43028 Gm33320-201ENSMUST00000192232 530 ntBASIC15.15■□□□□ 0.02
Gdf6P43028 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.15■□□□□ 0.02
Gdf6P43028 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gdf6P43028 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gdf6P43028 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Gdf6P43028 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Gdf6P43028 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.14■□□□□ 0.01
Gdf6P43028 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Gdf6P43028 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Gdf6P43028 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Gdf6P43028 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.14■□□□□ 0.01
Gdf6P43028 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gdf6P43028 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms