Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.05□□□□□ -0.48
Abca1P41233 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.05□□□□□ -0.48
Abca1P41233 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Abca1P41233 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.05□□□□□ -0.48
Abca1P41233 Gm24694-201ENSMUST00000180054 110 ntBASIC12.05□□□□□ -0.48
Abca1P41233 Gm27663-201ENSMUST00000184839 110 ntBASIC12.05□□□□□ -0.48
Abca1P41233 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.05□□□□□ -0.48
Abca1P41233 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.05□□□□□ -0.48
Abca1P41233 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Abca1P41233 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Abca1P41233 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.05□□□□□ -0.48
Abca1P41233 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Abca1P41233 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.05□□□□□ -0.48
Abca1P41233 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.05□□□□□ -0.48
Abca1P41233 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.04□□□□□ -0.48
Abca1P41233 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Abca1P41233 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Gm22189-201ENSMUST00000103822 86 ntBASIC12.04□□□□□ -0.48
Abca1P41233 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.04□□□□□ -0.48
Abca1P41233 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.04□□□□□ -0.48
Abca1P41233 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Abca1P41233 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.04□□□□□ -0.48
Abca1P41233 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 BC037039-201ENSMUST00000192003 2205 ntBASIC12.04□□□□□ -0.48
Abca1P41233 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Abca1P41233 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Abca1P41233 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.04□□□□□ -0.48
Abca1P41233 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Abca1P41233 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.03□□□□□ -0.48
Abca1P41233 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.03□□□□□ -0.48
Abca1P41233 Gm44719-201ENSMUST00000206404 149 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.03□□□□□ -0.48
Abca1P41233 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Gm12859-201ENSMUST00000117834 427 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.03□□□□□ -0.48
Abca1P41233 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.03□□□□□ -0.48
Abca1P41233 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Abca1P41233 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abca1P41233 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abca1P41233 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Abca1P41233 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abca1P41233 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms