Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.68□□□□□ -0.38
Upk2P38575 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Upk2P38575 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Upk2P38575 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.68□□□□□ -0.38
Upk2P38575 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.68□□□□□ -0.38
Upk2P38575 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.68□□□□□ -0.38
Upk2P38575 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.68□□□□□ -0.38
Upk2P38575 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.68□□□□□ -0.38
Upk2P38575 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Upk2P38575 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.68□□□□□ -0.38
Upk2P38575 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk2P38575 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk2P38575 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Upk2P38575 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk2P38575 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.67□□□□□ -0.38
Upk2P38575 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk2P38575 Gm2810-201ENSMUST00000118681 990 ntBASIC12.67□□□□□ -0.38
Upk2P38575 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk2P38575 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.67□□□□□ -0.38
Upk2P38575 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Gm25911-201ENSMUST00000157621 56 ntBASIC12.67□□□□□ -0.38
Upk2P38575 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk2P38575 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.67□□□□□ -0.38
Upk2P38575 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.67□□□□□ -0.38
Upk2P38575 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk2P38575 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk2P38575 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Upk2P38575 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Upk2P38575 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk2P38575 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk2P38575 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Upk2P38575 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Upk2P38575 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.66□□□□□ -0.38
Upk2P38575 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms