Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp13P33435 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp13P33435 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp13P33435 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.8□□□□□ -0.04
Mmp13P33435 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Mmp13P33435 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Mmp13P33435 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.8□□□□□ -0.04
Mmp13P33435 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.8□□□□□ -0.04
Mmp13P33435 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.8□□□□□ -0.04
Mmp13P33435 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.8□□□□□ -0.04
Mmp13P33435 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Mmp13P33435 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Mmp13P33435 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp13P33435 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Mmp13P33435 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Mmp13P33435 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.79□□□□□ -0.04
Mmp13P33435 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.79□□□□□ -0.04
Mmp13P33435 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.79□□□□□ -0.04
Mmp13P33435 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Mmp13P33435 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.79□□□□□ -0.04
Mmp13P33435 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.79□□□□□ -0.04
Mmp13P33435 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.79□□□□□ -0.04
Mmp13P33435 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp13P33435 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.78□□□□□ -0.04
Mmp13P33435 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.78□□□□□ -0.04
Mmp13P33435 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Gm13597-201ENSMUST00000121239 375 ntBASIC14.78□□□□□ -0.04
Mmp13P33435 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.78□□□□□ -0.04
Mmp13P33435 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Gm27397-201ENSMUST00000184997 107 ntBASIC14.78□□□□□ -0.04
Mmp13P33435 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.78□□□□□ -0.04
Mmp13P33435 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.78□□□□□ -0.04
Mmp13P33435 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Mmp13P33435 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp13P33435 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Mmp13P33435 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mmp13P33435 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms