Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm44855-201ENSMUST00000205725 362 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 Gm45453-201ENSMUST00000211758 853 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.39□□□□□ -0.11
Nckap1P28660 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.39□□□□□ -0.11
Nckap1P28660 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.38□□□□□ -0.11
Nckap1P28660 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.38□□□□□ -0.11
Nckap1P28660 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Nckap1P28660 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.38□□□□□ -0.11
Nckap1P28660 Gm3436-201ENSMUST00000179930 840 ntBASIC14.38□□□□□ -0.11
Nckap1P28660 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.38□□□□□ -0.11
Nckap1P28660 Gm37230-201ENSMUST00000194491 818 ntBASIC14.38□□□□□ -0.11
Nckap1P28660 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nckap1P28660 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.38□□□□□ -0.11
Nckap1P28660 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.38□□□□□ -0.11
Nckap1P28660 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Nckap1P28660 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nckap1P28660 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Nckap1P28660 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Nckap1P28660 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nckap1P28660 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nckap1P28660 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nckap1P28660 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.37□□□□□ -0.11
Nckap1P28660 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.37□□□□□ -0.11
Nckap1P28660 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.37□□□□□ -0.11
Nckap1P28660 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nckap1P28660 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.37□□□□□ -0.11
Nckap1P28660 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nckap1P28660 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.36□□□□□ -0.11
Nckap1P28660 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nckap1P28660 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.36□□□□□ -0.11
Nckap1P28660 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.36□□□□□ -0.11
Nckap1P28660 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Gm11424-201ENSMUST00000121929 829 ntBASIC14.36□□□□□ -0.11
Nckap1P28660 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.36□□□□□ -0.11
Nckap1P28660 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.36□□□□□ -0.11
Nckap1P28660 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nckap1P28660 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nckap1P28660 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms