Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40lgP27548 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm9385-201ENSMUST00000117563 472 ntBASIC13.35□□□□□ -0.27
Cd40lgP27548 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm16026-204ENSMUST00000162652 683 ntBASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.35□□□□□ -0.27
Cd40lgP27548 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cd40lgP27548 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40lgP27548 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.34□□□□□ -0.27
Cd40lgP27548 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Gm18737-201ENSMUST00000173594 937 ntBASIC13.34□□□□□ -0.27
Cd40lgP27548 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40lgP27548 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.34□□□□□ -0.27
Cd40lgP27548 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Cd40lgP27548 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cd40lgP27548 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40lgP27548 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40lgP27548 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40lgP27548 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40lgP27548 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40lgP27548 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40lgP27548 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cd40lgP27548 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Gm23935-201ENSMUST00000102303 57 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Gm24270-201ENSMUST00000102326 57 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Gm24245-201ENSMUST00000157318 57 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Rpph1-201ENSMUST00000175096 319 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Gm45612-201ENSMUST00000211320 160 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms