Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.08□□□□□ -0.48
Col8a2P25318 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col8a2P25318 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Col8a2P25318 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.07□□□□□ -0.48
Col8a2P25318 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Gm9719-201ENSMUST00000162765 543 ntBASIC12.07□□□□□ -0.48
Col8a2P25318 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.07□□□□□ -0.48
Col8a2P25318 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Gm27631-201ENSMUST00000184163 466 ntBASIC12.07□□□□□ -0.48
Col8a2P25318 Gm27321-201ENSMUST00000185021 205 ntBASIC12.07□□□□□ -0.48
Col8a2P25318 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.07□□□□□ -0.48
Col8a2P25318 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col8a2P25318 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col8a2P25318 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Mir7023-201ENSMUST00000185093 64 ntBASIC12.06□□□□□ -0.48
Col8a2P25318 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.06□□□□□ -0.48
Col8a2P25318 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a2P25318 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a2P25318 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col8a2P25318 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col8a2P25318 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.05□□□□□ -0.48
Col8a2P25318 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col8a2P25318 Gm5566-201ENSMUST00000116118 459 ntBASIC12.05□□□□□ -0.48
Col8a2P25318 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.05□□□□□ -0.48
Col8a2P25318 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Col8a2P25318 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.05□□□□□ -0.48
Col8a2P25318 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Col8a2P25318 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Gm9063-201ENSMUST00000223299 582 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms