Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Gm5779-201ENSMUST00000218467 910 ntBASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Tnfrsf1bP25119 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Gm13015-201ENSMUST00000118674 204 ntBASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.38□□□□□ -0.27
Tnfrsf1bP25119 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Gm25948-201ENSMUST00000175334 112 ntBASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1bP25119 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1bP25119 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms