Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.49□□□□□ -0.25
Clk1P22518 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.49□□□□□ -0.25
Clk1P22518 Gm13597-201ENSMUST00000121239 375 ntBASIC13.49□□□□□ -0.25
Clk1P22518 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
Clk1P22518 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Clk1P22518 Gm16026-204ENSMUST00000162652 683 ntBASIC13.49□□□□□ -0.25
Clk1P22518 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Clk1P22518 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
Clk1P22518 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.49□□□□□ -0.25
Clk1P22518 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.49□□□□□ -0.25
Clk1P22518 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.49□□□□□ -0.25
Clk1P22518 Sybu-209ENSMUST00000228639 4113 ntBASIC13.49□□□□□ -0.25
Clk1P22518 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.48□□□□□ -0.25
Clk1P22518 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.48□□□□□ -0.25
Clk1P22518 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.48□□□□□ -0.25
Clk1P22518 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.48□□□□□ -0.25
Clk1P22518 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clk1P22518 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Clk1P22518 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Clk1P22518 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clk1P22518 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.47□□□□□ -0.25
Clk1P22518 Gm15467-201ENSMUST00000120582 445 ntBASIC13.47□□□□□ -0.25
Clk1P22518 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.47□□□□□ -0.25
Clk1P22518 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms