Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prim1P20664 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prim1P20664 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Prim1P20664 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prim1P20664 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prim1P20664 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prim1P20664 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prim1P20664 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Prim1P20664 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.35■□□□□ 0.53
Prim1P20664 Gm20445-201ENSMUST00000061905 565 ntBASIC18.35■□□□□ 0.53
Prim1P20664 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prim1P20664 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prim1P20664 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.34■□□□□ 0.53
Prim1P20664 Gm12849-201ENSMUST00000120013 739 ntBASIC18.34■□□□□ 0.53
Prim1P20664 Gm12882-201ENSMUST00000121696 517 ntBASIC18.34■□□□□ 0.53
Prim1P20664 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.34■□□□□ 0.53
Prim1P20664 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.34■□□□□ 0.53
Prim1P20664 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.34■□□□□ 0.53
Prim1P20664 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.34■□□□□ 0.53
Prim1P20664 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Prim1P20664 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prim1P20664 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prim1P20664 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.33■□□□□ 0.53
Prim1P20664 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Prim1P20664 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prim1P20664 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prim1P20664 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Prim1P20664 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Prim1P20664 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Gm14042-201ENSMUST00000120139 833 ntBASIC18.33■□□□□ 0.52
Prim1P20664 Gm14363-201ENSMUST00000122304 409 ntBASIC18.33■□□□□ 0.52
Prim1P20664 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Prim1P20664 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.33■□□□□ 0.52
Prim1P20664 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC18.33■□□□□ 0.52
Prim1P20664 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prim1P20664 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Prim1P20664 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Prim1P20664 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.32■□□□□ 0.52
Prim1P20664 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.32■□□□□ 0.52
Prim1P20664 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Gm12859-201ENSMUST00000117834 427 ntBASIC18.32■□□□□ 0.52
Prim1P20664 Gm21854-201ENSMUST00000179901 471 ntBASIC18.32■□□□□ 0.52
Prim1P20664 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC18.32■□□□□ 0.52
Prim1P20664 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.32■□□□□ 0.52
Prim1P20664 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC18.32■□□□□ 0.52
Prim1P20664 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.32■□□□□ 0.52
Prim1P20664 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.32■□□□□ 0.52
Prim1P20664 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Prim1P20664 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms