Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hoxc9P09633 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.6■□□□□ 0.57
Hoxc9P09633 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Gm18027-201ENSMUST00000218947 619 ntBASIC18.6■□□□□ 0.57
Hoxc9P09633 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.6■□□□□ 0.57
Hoxc9P09633 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.6■□□□□ 0.57
Hoxc9P09633 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
Hoxc9P09633 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc9P09633 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.6■□□□□ 0.57
Hoxc9P09633 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hoxc9P09633 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.59■□□□□ 0.57
Hoxc9P09633 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hoxc9P09633 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm27892-201ENSMUST00000185017 106 ntBASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm2495-201ENSMUST00000191160 466 ntBASIC18.59■□□□□ 0.57
Hoxc9P09633 Gm18905-201ENSMUST00000205454 928 ntBASIC18.59■□□□□ 0.57
Hoxc9P09633 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.59■□□□□ 0.57
Hoxc9P09633 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.59■□□□□ 0.57
Hoxc9P09633 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hoxc9P09633 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hoxc9P09633 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc9P09633 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxc9P09633 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxc9P09633 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxc9P09633 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxc9P09633 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Hoxc9P09633 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxc9P09633 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.58■□□□□ 0.56
Hoxc9P09633 Gm11425-201ENSMUST00000119608 498 ntBASIC18.58■□□□□ 0.56
Hoxc9P09633 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.58■□□□□ 0.56
Hoxc9P09633 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.58■□□□□ 0.56
Hoxc9P09633 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.58■□□□□ 0.56
Hoxc9P09633 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Hoxc9P09633 Gm9396-201ENSMUST00000076703 567 ntBASIC18.58■□□□□ 0.56
Hoxc9P09633 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxc9P09633 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.57■□□□□ 0.56
Hoxc9P09633 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.57■□□□□ 0.56
Hoxc9P09633 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
Hoxc9P09633 Gm6244-201ENSMUST00000178732 841 ntBASIC18.57■□□□□ 0.56
Hoxc9P09633 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.57■□□□□ 0.56
Hoxc9P09633 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.57■□□□□ 0.56
Hoxc9P09633 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.57■□□□□ 0.56
Hoxc9P09633 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxc9P09633 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.57■□□□□ 0.56
Hoxc9P09633 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms