Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NclP09405 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC21.43■■□□□ 1.02
NclP09405 Gm16215-201ENSMUST00000161990 637 ntBASIC21.43■■□□□ 1.02
NclP09405 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 AC238811.1-201ENSMUST00000225302 441 ntBASIC21.43■■□□□ 1.02
NclP09405 AC123645.1-201ENSMUST00000228469 605 ntBASIC21.43■■□□□ 1.02
NclP09405 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Gm5421-201ENSMUST00000181698 2354 ntBASIC21.43■■□□□ 1.02
NclP09405 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
NclP09405 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC21.42■■□□□ 1.02
NclP09405 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 AA619741-201ENSMUST00000195095 646 ntBASIC21.42■■□□□ 1.02
NclP09405 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Gm13034-201ENSMUST00000121342 3177 ntBASIC21.42■■□□□ 1.02
NclP09405 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NclP09405 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NclP09405 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Gm37305-201ENSMUST00000195714 4279 ntBASIC21.41■■□□□ 1.02
NclP09405 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
NclP09405 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NclP09405 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Gm3436-201ENSMUST00000179930 840 ntBASIC21.41■■□□□ 1.02
NclP09405 Gm43703-201ENSMUST00000200523 763 ntBASIC21.41■■□□□ 1.02
NclP09405 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Gm10605-202ENSMUST00000183019 3198 ntBASIC21.41■■□□□ 1.02
NclP09405 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NclP09405 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC21.4■■□□□ 1.02
NclP09405 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
NclP09405 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Mir125a-201ENSMUST00000083545 68 ntBASIC21.4■■□□□ 1.02
NclP09405 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NclP09405 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NclP09405 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
NclP09405 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NclP09405 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Gm7488-201ENSMUST00000117148 684 ntBASIC21.39■■□□□ 1.01
NclP09405 Gm10275-202ENSMUST00000168697 495 ntBASIC21.39■■□□□ 1.01
NclP09405 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Gm44855-201ENSMUST00000205725 362 ntBASIC21.39■■□□□ 1.01
NclP09405 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
NclP09405 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
NclP09405 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.39■■□□□ 1.01
NclP09405 Gm10275-201ENSMUST00000092620 635 ntBASIC21.39■■□□□ 1.01
NclP09405 Gm9768-201ENSMUST00000206007 2861 ntBASIC21.39■■□□□ 1.01
NclP09405 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
NclP09405 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC21.39■■□□□ 1.01
NclP09405 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC21.39■■□□□ 1.01
NclP09405 Gm45751-201ENSMUST00000210185 1573 ntBASIC21.39■■□□□ 1.01
NclP09405 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC21.39■■□□□ 1.01
NclP09405 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NclP09405 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms