Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxb3P09026 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxb3P09026 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hoxb3P09026 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hoxb3P09026 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.11
Hoxb3P09026 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxb3P09026 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Gm22189-201ENSMUST00000103822 86 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Gm24543-201ENSMUST00000103867 82 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.33□□□□□ -0.12
Hoxb3P09026 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxb3P09026 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxb3P09026 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxb3P09026 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm29310-201ENSMUST00000185468 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21825-201ENSMUST00000185728 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm29109-201ENSMUST00000185895 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21896-201ENSMUST00000186520 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21873-201ENSMUST00000186728 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21794-201ENSMUST00000187056 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21880-201ENSMUST00000187275 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21826-201ENSMUST00000187451 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21198-201ENSMUST00000188393 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21749-201ENSMUST00000189343 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21901-201ENSMUST00000189568 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm29424-201ENSMUST00000189716 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm28599-201ENSMUST00000189838 694 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21867-201ENSMUST00000189917 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm29269-201ENSMUST00000190087 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21722-201ENSMUST00000190153 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm28423-201ENSMUST00000190701 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21899-201ENSMUST00000190745 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21910-201ENSMUST00000191163 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21849-201ENSMUST00000191571 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm28678-201ENSMUST00000191593 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm20910-201ENSMUST00000193268 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Gm21871-201ENSMUST00000194621 696 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 Olfr286-202ENSMUST00000205305 969 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.32□□□□□ -0.12
Hoxb3P09026 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms