Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.27■□□□□ 0.04
Hoxc8P09025 AY702102-202ENSMUST00000194651 1173 ntBASIC15.27■□□□□ 0.04
Hoxc8P09025 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.27■□□□□ 0.04
Hoxc8P09025 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.27■□□□□ 0.04
Hoxc8P09025 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Hoxc8P09025 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hoxc8P09025 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxc8P09025 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc8P09025 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.27■□□□□ 0.03
Hoxc8P09025 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Hoxc8P09025 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc8P09025 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
Hoxc8P09025 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc8P09025 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc8P09025 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hoxc8P09025 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc8P09025 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxc8P09025 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.27■□□□□ 0.03
Hoxc8P09025 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.27■□□□□ 0.03
Hoxc8P09025 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Hoxc8P09025 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.26■□□□□ 0.03
Hoxc8P09025 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.26■□□□□ 0.03
Hoxc8P09025 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.26■□□□□ 0.03
Hoxc8P09025 Gm17794-201ENSMUST00000220252 955 ntBASIC15.26■□□□□ 0.03
Hoxc8P09025 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.26■□□□□ 0.03
Hoxc8P09025 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hoxc8P09025 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxc8P09025 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm12390-201ENSMUST00000117897 397 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm24420-201ENSMUST00000176676 59 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm8927-201ENSMUST00000181978 981 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.25■□□□□ 0.03
Hoxc8P09025 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Hoxc8P09025 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.25■□□□□ 0.03
Hoxc8P09025 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm9899-201ENSMUST00000065519 555 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm3222-201ENSMUST00000071282 990 ntBASIC15.25■□□□□ 0.03
Hoxc8P09025 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.25■□□□□ 0.03
Hoxc8P09025 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hoxc8P09025 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.25■□□□□ 0.03
Hoxc8P09025 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc8P09025 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Gm11425-201ENSMUST00000119608 498 ntBASIC15.24■□□□□ 0.03
Hoxc8P09025 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc8P09025 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc8P09025 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms