Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Gm13836-201ENSMUST00000121159 501 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.68□□□□□ -0.22
ApoeP08226 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ApoeP08226 Gm7787-201ENSMUST00000216858 688 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ApoeP08226 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.68□□□□□ -0.22
ApoeP08226 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ApoeP08226 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ApoeP08226 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ApoeP08226 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ApoeP08226 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
ApoeP08226 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
ApoeP08226 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Olfr286-202ENSMUST00000205305 969 ntBASIC13.67□□□□□ -0.22
ApoeP08226 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.67□□□□□ -0.22
ApoeP08226 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.67□□□□□ -0.22
ApoeP08226 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ApoeP08226 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ApoeP08226 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
ApoeP08226 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ApoeP08226 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ApoeP08226 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.66□□□□□ -0.22
ApoeP08226 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gm7284-201ENSMUST00000131667 944 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gm6089-201ENSMUST00000197666 938 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Gm2451-201ENSMUST00000199447 999 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Gm10290-201ENSMUST00000200451 999 ntBASIC13.66□□□□□ -0.22
ApoeP08226 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.66□□□□□ -0.22
ApoeP08226 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.66□□□□□ -0.22
ApoeP08226 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms