Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CfdP03953 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.08□□□□□ -0.47
CfdP03953 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CfdP03953 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CfdP03953 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CfdP03953 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CfdP03953 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CfdP03953 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.08□□□□□ -0.48
CfdP03953 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CfdP03953 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.08□□□□□ -0.48
CfdP03953 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.08□□□□□ -0.48
CfdP03953 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.08□□□□□ -0.48
CfdP03953 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CfdP03953 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.07□□□□□ -0.48
CfdP03953 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CfdP03953 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CfdP03953 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Gm13464-201ENSMUST00000119418 935 ntBASIC12.07□□□□□ -0.48
CfdP03953 Gm14042-201ENSMUST00000120139 833 ntBASIC12.07□□□□□ -0.48
CfdP03953 Gm11780-201ENSMUST00000136880 516 ntBASIC12.07□□□□□ -0.48
CfdP03953 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CfdP03953 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CfdP03953 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CfdP03953 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.07□□□□□ -0.48
CfdP03953 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CfdP03953 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
CfdP03953 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CfdP03953 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CfdP03953 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.06□□□□□ -0.48
CfdP03953 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms