Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxa3P02831 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Gm38294-201ENSMUST00000192831 381 ntBASIC12.14□□□□□ -0.47
Hoxa3P02831 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.14□□□□□ -0.47
Hoxa3P02831 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.14□□□□□ -0.47
Hoxa3P02831 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa3P02831 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa3P02831 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa3P02831 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm6415-201ENSMUST00000118488 348 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm13223-201ENSMUST00000118609 747 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm14057-201ENSMUST00000120631 482 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm27622-201ENSMUST00000183779 60 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm27430-201ENSMUST00000184585 107 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Gm44333-201ENSMUST00000197168 107 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa3P02831 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.13□□□□□ -0.47
Hoxa3P02831 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa3P02831 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxa3P02831 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Hoxa3P02831 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxa3P02831 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm12134-201ENSMUST00000122109 520 ntBASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm9824-201ENSMUST00000178707 561 ntBASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.12□□□□□ -0.47
Hoxa3P02831 Gm27618-201ENSMUST00000183671 60 ntBASIC12.12□□□□□ -0.47
Hoxa3P02831 Mir7023-201ENSMUST00000185093 64 ntBASIC12.12□□□□□ -0.47
Hoxa3P02831 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms