Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.47■□□□□ 0.39
Col4a1P02463 Gm12928-201ENSMUST00000117115 573 ntBASIC17.47■□□□□ 0.39
Col4a1P02463 Gm12485-201ENSMUST00000119641 291 ntBASIC17.47■□□□□ 0.39
Col4a1P02463 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.47■□□□□ 0.39
Col4a1P02463 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.47■□□□□ 0.39
Col4a1P02463 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.47■□□□□ 0.39
Col4a1P02463 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Gm6091-201ENSMUST00000098307 165 ntBASIC17.47■□□□□ 0.39
Col4a1P02463 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.47■□□□□ 0.39
Col4a1P02463 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a1P02463 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.46■□□□□ 0.39
Col4a1P02463 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.46■□□□□ 0.39
Col4a1P02463 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.46■□□□□ 0.39
Col4a1P02463 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.46■□□□□ 0.39
Col4a1P02463 Gm6983-201ENSMUST00000214912 628 ntBASIC17.46■□□□□ 0.39
Col4a1P02463 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.46■□□□□ 0.39
Col4a1P02463 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a1P02463 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Col4a1P02463 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col4a1P02463 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.46■□□□□ 0.38
Col4a1P02463 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col4a1P02463 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Col4a1P02463 Gm29608-201ENSMUST00000190444 463 ntBASIC17.45■□□□□ 0.38
Col4a1P02463 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col4a1P02463 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.45■□□□□ 0.38
Col4a1P02463 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.45■□□□□ 0.38
Col4a1P02463 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.45■□□□□ 0.38
Col4a1P02463 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.45■□□□□ 0.38
Col4a1P02463 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a1P02463 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.45■□□□□ 0.38
Col4a1P02463 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col4a1P02463 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.44■□□□□ 0.38
Col4a1P02463 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.44■□□□□ 0.38
Col4a1P02463 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col4a1P02463 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col4a1P02463 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Col4a1P02463 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a1P02463 Gm29127-201ENSMUST00000188304 517 ntBASIC17.44■□□□□ 0.38
Col4a1P02463 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.44■□□□□ 0.38
Col4a1P02463 Gm45331-201ENSMUST00000209868 554 ntBASIC17.44■□□□□ 0.38
Col4a1P02463 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms