Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Gm15693-201ENSMUST00000120470 637 ntBASIC14.15□□□□□ -0.14
ClppO88696 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.15□□□□□ -0.14
ClppO88696 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ClppO88696 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.15□□□□□ -0.14
ClppO88696 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ClppO88696 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClppO88696 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ClppO88696 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ClppO88696 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
ClppO88696 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.14□□□□□ -0.15
ClppO88696 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.14□□□□□ -0.15
ClppO88696 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
ClppO88696 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.14□□□□□ -0.15
ClppO88696 Gm38225-201ENSMUST00000194001 393 ntBASIC14.14□□□□□ -0.15
ClppO88696 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ClppO88696 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.14□□□□□ -0.15
ClppO88696 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClppO88696 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ClppO88696 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ClppO88696 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ClppO88696 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.13□□□□□ -0.15
ClppO88696 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.13□□□□□ -0.15
ClppO88696 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
ClppO88696 Gm9824-201ENSMUST00000178707 561 ntBASIC14.13□□□□□ -0.15
ClppO88696 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.13□□□□□ -0.15
ClppO88696 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.13□□□□□ -0.15
ClppO88696 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ClppO88696 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
ClppO88696 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms