Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.05■□□□□ -0
Ttc3O88196 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ttc3O88196 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ttc3O88196 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ttc3O88196 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.04■□□□□ -0
Ttc3O88196 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Ttc3O88196 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 Gm5354-201ENSMUST00000182417 973 ntBASIC15.04■□□□□ -0
Ttc3O88196 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ttc3O88196 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ttc3O88196 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ttc3O88196 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ttc3O88196 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.04■□□□□ -0
Ttc3O88196 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.04■□□□□ -0
Ttc3O88196 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.04■□□□□ -0
Ttc3O88196 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.04■□□□□ -0
Ttc3O88196 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.04■□□□□ -0
Ttc3O88196 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ttc3O88196 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.03■□□□□ -0
Ttc3O88196 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.03■□□□□ -0
Ttc3O88196 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ttc3O88196 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.03■□□□□ -0
Ttc3O88196 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.03■□□□□ -0
Ttc3O88196 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.03■□□□□ -0
Ttc3O88196 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.03■□□□□ -0
Ttc3O88196 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.03■□□□□ -0
Ttc3O88196 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ttc3O88196 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ttc3O88196 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.02■□□□□ -0
Ttc3O88196 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ttc3O88196 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ttc3O88196 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.02■□□□□ -0
Ttc3O88196 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ttc3O88196 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ttc3O88196 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ttc3O88196 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.02■□□□□ -0
Ttc3O88196 Gm15823-201ENSMUST00000064305 670 ntBASIC15.02■□□□□ -0
Ttc3O88196 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ttc3O88196 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ttc3O88196 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ttc3O88196 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
Ttc3O88196 Gm12341-201ENSMUST00000119724 503 ntBASIC15.02□□□□□ -0.01
Ttc3O88196 Gm11918-201ENSMUST00000121660 179 ntBASIC15.02□□□□□ -0.01
Ttc3O88196 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.02□□□□□ -0.01
Ttc3O88196 Gm12091-201ENSMUST00000146791 830 ntBASIC15.02□□□□□ -0.01
Ttc3O88196 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Ttc3O88196 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.02□□□□□ -0.01
Ttc3O88196 Gm18187-201ENSMUST00000196476 984 ntBASIC15.02□□□□□ -0.01
Ttc3O88196 Gm17795-201ENSMUST00000214505 757 ntBASIC15.02□□□□□ -0.01
Ttc3O88196 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.02□□□□□ -0.01
Ttc3O88196 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ttc3O88196 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms