Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ubr1O70481 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Mir1982-201ENSMUST00000157368 74 ntBASIC18.43■□□□□ 0.54
Ubr1O70481 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ubr1O70481 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
Ubr1O70481 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr1O70481 Gm11814-201ENSMUST00000119515 929 ntBASIC18.42■□□□□ 0.54
Ubr1O70481 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.42■□□□□ 0.54
Ubr1O70481 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.42■□□□□ 0.54
Ubr1O70481 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.42■□□□□ 0.54
Ubr1O70481 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.42■□□□□ 0.54
Ubr1O70481 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.42■□□□□ 0.54
Ubr1O70481 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ubr1O70481 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr1O70481 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.41■□□□□ 0.54
Ubr1O70481 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.41■□□□□ 0.54
Ubr1O70481 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Gm17420-201ENSMUST00000164753 153 ntBASIC18.41■□□□□ 0.54
Ubr1O70481 Gm37424-201ENSMUST00000191727 561 ntBASIC18.41■□□□□ 0.54
Ubr1O70481 Gm18473-201ENSMUST00000220543 868 ntBASIC18.41■□□□□ 0.54
Ubr1O70481 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ubr1O70481 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.41■□□□□ 0.54
Ubr1O70481 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr1O70481 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ubr1O70481 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubr1O70481 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 Proscos-202ENSMUST00000178990 666 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 Gm45784-201ENSMUST00000188360 142 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubr1O70481 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubr1O70481 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ubr1O70481 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Ubr1O70481 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Ubr1O70481 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubr1O70481 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.4■□□□□ 0.54
Ubr1O70481 Gm29127-201ENSMUST00000188304 517 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
Ubr1O70481 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Gm6091-201ENSMUST00000098307 165 ntBASIC18.4■□□□□ 0.54
Ubr1O70481 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ubr1O70481 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubr1O70481 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Ubr1O70481 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ubr1O70481 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ubr1O70481 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms