Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.63■□□□□ 0.09
Per1O35973 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Per1O35973 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.63■□□□□ 0.09
Per1O35973 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Per1O35973 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Per1O35973 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.62■□□□□ 0.09
Per1O35973 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.62■□□□□ 0.09
Per1O35973 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Per1O35973 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.62■□□□□ 0.09
Per1O35973 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Per1O35973 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Per1O35973 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.62■□□□□ 0.09
Per1O35973 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Per1O35973 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Gm15321-201ENSMUST00000121290 288 ntBASIC15.61■□□□□ 0.09
Per1O35973 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.61■□□□□ 0.09
Per1O35973 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.61■□□□□ 0.09
Per1O35973 Gm24694-201ENSMUST00000180054 110 ntBASIC15.61■□□□□ 0.09
Per1O35973 Gm27663-201ENSMUST00000184839 110 ntBASIC15.61■□□□□ 0.09
Per1O35973 Gm29667-201ENSMUST00000190817 490 ntBASIC15.61■□□□□ 0.09
Per1O35973 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Per1O35973 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Per1O35973 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Syt7-204ENSMUST00000223586 1344 ntBASIC15.61■□□□□ 0.09
Per1O35973 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.61■□□□□ 0.09
Per1O35973 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.61■□□□□ 0.09
Per1O35973 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Per1O35973 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Per1O35973 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.6■□□□□ 0.09
Per1O35973 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.6■□□□□ 0.09
Per1O35973 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Per1O35973 Gm27437-201ENSMUST00000183429 107 ntBASIC15.6■□□□□ 0.09
Per1O35973 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Per1O35973 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Per1O35973 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.6■□□□□ 0.09
Per1O35973 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Per1O35973 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.6■□□□□ 0.09
Per1O35973 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Per1O35973 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms