Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44357-201ENSMUST00000195897 142 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm19658-201ENSMUST00000196231 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44367-201ENSMUST00000196836 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44350-201ENSMUST00000197197 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44390-201ENSMUST00000197533 144 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44313-201ENSMUST00000198018 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44486-201ENSMUST00000198508 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44314-201ENSMUST00000199263 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44394-201ENSMUST00000199558 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44484-201ENSMUST00000199873 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44466-201ENSMUST00000200264 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm44359-201ENSMUST00000200671 138 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shisa8J3QNX5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.19□□□□□ -0.3
Shisa8J3QNX5 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa8J3QNX5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Gm9726-201ENSMUST00000180321 678 ntBASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Gm37153-201ENSMUST00000193637 231 ntBASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms