Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.33■□□□□ 0.04
Gm17535J3KMR8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gm29667-201ENSMUST00000190817 490 ntBASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.32■□□□□ 0.04
Gm17535J3KMR8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Syt7-204ENSMUST00000223586 1344 ntBASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm17535J3KMR8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Gm15321-201ENSMUST00000121290 288 ntBASIC15.31■□□□□ 0.04
Gm17535J3KMR8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.31■□□□□ 0.04
Gm17535J3KMR8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm17535J3KMR8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Gm33320-201ENSMUST00000192232 530 ntBASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms