Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Gm25025-201ENSMUST00000175018 111 ntBASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 AL589696.1-201ENSMUST00000225711 330 ntBASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 AC158595.1-201ENSMUST00000217989 1435 ntBASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Phf7-206ENSMUST00000228437 1373 ntBASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm12584-201ENSMUST00000117109 1105 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm23884-201ENSMUST00000122687 294 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm8582-201ENSMUST00000164061 789 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm8652-201ENSMUST00000181363 964 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 AC132384.6-201ENSMUST00000218976 1206 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 AC123062.1-201ENSMUST00000221287 481 ntBASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nkx1-1G3UXB3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm43216-201ENSMUST00000196295 1333 ntBASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm15403-201ENSMUST00000119343 1227 ntBASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm6222-201ENSMUST00000120787 396 ntBASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 AC117949.2-201ENSMUST00000225900 584 ntBASIC16.74■□□□□ 0.27
Nkx1-1G3UXB3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms